(PS)2: Protein Structure Prediction Server

Molecular Bioinformatics Center


(PS)²: Protein Structure Prediction Server

(PS)² Server

Documentation

CASP6 predictions

Sample output

Contact

(PS)² (pronouced PS square) : (PS)² is an automated homology modeling server. The method uses an effective consensus strategy by combining PSI-BLAST, IMPALA, and T-Coffee in both template selection and target-template alignment. The final three dimensional structure is built using the modeling package MODELLER.

Template(s) selection :		Both (PSI-BLAST & IMPALA) PSI-BLAST IMPALA
		Use this PDB template (xxxx_y)
		where xxxx is the PDB code and y is the chain

Enter query sequence (in FASTA format) :

Model building :		MODELLER ( Free for academic users )
		RAMP

Batch (by mail) :	Your mail address : , mail title :
Interactive :	Template & structure visualization (not recommended for longer sequence)

Last updated 2007-03-20 by C.-C. Chen, J.-M. Yang, J.-K. Hwang